Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R884_PETMAUncharacterized protein. (1041 aa)    
Predicted Functional Partners:
S4RR09_PETMA
Uncharacterized protein.
   
 0.849
S4RA81_PETMA
NCK interacting protein with SH3 domain.
    
 
 0.722
S4RMC5_PETMA
ATPase family AAA domain containing 2B.
   
  
 0.683
S4RF48_PETMA
Growth arrest-specific 7a.
    
 0.681
S4RNF7_PETMA
DEAD (Asp-Glu-Ala-Asp) box polypeptide 43.
      
 0.671
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
    
 0.634
S4RAS4_PETMA
Uncharacterized protein.
    
 
 0.615
S4R7T0_PETMA
WH2 domain-containing protein.
   
 0.599
S4RFJ4_PETMA
WASP like actin nucleation promoting factor.
   
 0.599
S4RNZ0_PETMA
WASP like actin nucleation promoting factor.
   
 0.599
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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