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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8A3_PETMACRAL_TRIO_N domain-containing protein. (124 aa)    
Predicted Functional Partners:
S4R9B1_PETMA
Si:dkey-221h15.4; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.520
S4RHU0_PETMA
Uncharacterized protein.
    
  0.520
S4RW07_PETMA
Uncharacterized protein.
    
  0.520
S4RBE7_PETMA
Ankyrin repeat and FYVE domain containing 1.
    
 0.518
S4R6G9_PETMA
Transforming growth factor beta regulator 4.
     
 0.513
S4R4N9_PETMA
Clathrin heavy chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin heavy chain family.
     
 0.454
S4RC08_PETMA
Uncharacterized protein.
     
 0.454
S4RA39_PETMA
Non-lysosomal glucosylceramidase; Non-lysosomal glucosylceramidase that catalyzes the hydrolysis of glucosylceramide (GlcCer) to free glucose and ceramide.
    
 0.408
S4RD39_PETMA
Adaptor related protein complex 3 subunit delta 1.
    
 0.408
S4RF21_PETMA
Adaptin_N domain-containing protein.
    
 0.408
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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