STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ECHDC3Enoyl-CoA hydratase domain containing 3. (250 aa)    
Predicted Functional Partners:
S4RBE5_PETMA
CDC-like kinase 2a.
 
      0.827
S4RPC9_PETMA
Hydroxyacyl-CoA dehydrogenase.
 
   
 0.655
S4RTJ9_PETMA
Acyl-CoA_dh_N domain-containing protein.
   
 
 0.495
S4R8H6_PETMA
Uncharacterized protein.
      
 0.458
S4RDS9_PETMA
Phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma).
      
 0.458
S4RPH6_PETMA
C2 domain-containing protein.
      
 0.457
S4RXU8_PETMA
Uncharacterized protein.
 
      0.451
S4RAL4_PETMA
Small integral membrane protein 8.
      
 0.448
S4RNS8_PETMA
Zinc finger, C2HC-type containing 1A.
      
 0.437
S4RVE9_PETMA
Uncharacterized protein.
      
 0.437
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.