Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8A6_PETMAUncharacterized protein. (1372 aa)    
Predicted Functional Partners:
S4RZQ0_PETMA
RING-type domain-containing protein.
    
 
 0.589
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.583
S4RE61_PETMA
Adhesion G protein-coupled receptor V1; Belongs to the G-protein coupled receptor 2 family.
  
 
 
 0.575
S4R848_PETMA
Uncharacterized protein.
    
  0.548
BCL3
BCL3 transcription coactivator.
    
 
 0.502
S4RY49_PETMA
Male germ cell-associated kinase.
      
 0.456
S4RAH1_PETMA
Si:ch211-117c9.2.
   
 
 0.450
S4RA42_PETMA
Myosin IIIA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
      
 0.445
S4RRA9_PETMA
Solute carrier family 4 member 11.
      
 0.444
S4RY98_PETMA
SPARC related modular calcium binding 2.
      
 0.444
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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