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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CACTINCactin_mid domain-containing protein. (371 aa)    
Predicted Functional Partners:
S4RID1_PETMA
Translocase of inner mitochondrial membrane 10 homolog (yeast).
   
 0.983
S4RN59_PETMA
Translocase of inner mitochondrial membrane 9 homolog.
   
 0.983
S4RYZ3_PETMA
CactinC_cactus domain-containing protein.
 
     0.949
S4REF1_PETMA
Uncharacterized protein.
    
 0.914
S4R8Q7_PETMA
Translocase of inner mitochondrial membrane 23 homolog a (yeast).
   
 0.861
S4RX37_PETMA
Succinate dehydrogenase [ubiquinone] cytochrome b small subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q); Belongs to the CybS family.
   
 0.841
S4RFK9_PETMA
Translocase of inner mitochondrial membrane 29.
   
 
 0.783
NDUFA13
NADH:ubiquinone oxidoreductase subunit A13.
   
 
 0.764
S4RN48_PETMA
WD_REPEATS_REGION domain-containing protein.
    
  0.723
S4RPY2_PETMA
Cytochrome c-1.
   
 0.716
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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