Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8B8_PETMAUncharacterized protein. (589 aa)    
Predicted Functional Partners:
S4RRJ7_PETMA
CULT domain-containing protein.
    
 
 0.808
S4R587_PETMA
Uncharacterized protein.
    
   0.661
S4RIY0_PETMA
CHDNT domain-containing protein.
    
 0.643
S4RDJ6_PETMA
Uncharacterized protein.
    
   0.602
S4RS81_PETMA
NDK domain-containing protein; Belongs to the NDK family.
    
 0.583
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.582
S4R6N4_PETMA
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
 
  
 0.557
S4R848_PETMA
Uncharacterized protein.
    
  0.548
S4RFH9_PETMA
Speckle type BTB/POZ protein like a.
   
 0.517
S4RME2_PETMA
Uncharacterized protein.
   
 0.517
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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