Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8C0_PETMAVWFA domain-containing protein. (297 aa)    
Predicted Functional Partners:
GPANK1
G-patch domain and ankyrin repeats 1.
      
 0.516
S4RFR5_PETMA
Cyclin Q; Belongs to the cyclin family.
      
 0.462
S4RSH2_PETMA
Solute carrier family 35 member C1.
      
 0.462
S4RXM6_PETMA
Uncharacterized protein.
      
 0.460
COQ5
2-methoxy-6-polyprenyl-1,4-benzoquinol methylase, mitochondrial; Methyltransferase required for the conversion of 2- polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3-methyl- 6-methoxy-1,4-benzoquinol (DMQH2).
      
 0.459
SKA1
Spindle and kinetochore associated complex subunit 1.
      
 0.451
S4RF76_PETMA
WAPL cohesin release factor a.
      
 0.449
S4R4N6_PETMA
Solute carrier family 45 member 2.
      
 0.448
S4RKW6_PETMA
TMEM9 domain family, member B.
      
 0.441
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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