STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8C5_PETMACysteine/histidine-rich 1. (282 aa)    
Predicted Functional Partners:
S4RX11_PETMA
Uncharacterized protein.
    
 0.911
S4RDZ2_PETMA
Uncharacterized protein.
    
   0.665
S4RJE0_PETMA
Ubiquitin specific peptidase 13; Belongs to the peptidase C19 family.
    
  0.653
S4R4C4_PETMA
Gamma-synuclein; Belongs to the synuclein family.
    
 0.584
S4REI3_PETMA
Baculoviral IAP repeat containing 6.
    
 0.518
S4R4Q6_PETMA
Uridine-cytidine kinase; Belongs to the uridine kinase family.
   
  0.488
S4RAA7_PETMA
PEHE domain-containing protein.
      
 0.479
S4RC29_PETMA
Uncharacterized protein.
    
  0.463
NMRK2
Muscle-specific beta 1 integrin binding protein 2.
    
  0.463
CTNNB1
Catenin beta 1.
    
  0.463
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.