Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8D7_PETMABardet-Biedl syndrome 5 protein homolog; Required for ciliogenesis; Belongs to the BBS5 family. (342 aa)    
Predicted Functional Partners:
S4RCU3_PETMA
Bardet-Biedl syndrome 7.
   
 0.996
S4RL84_PETMA
Bardet-Biedl syndrome 2 protein homolog.
    
 0.995
S4RMU3_PETMA
Bardet-Biedl syndrome 1.
    
 0.994
S4RQ24_PETMA
Bardet-Biedl syndrome 4.
    
 0.982
S4RBX0_PETMA
Uncharacterized protein.
  
 
 0.969
S4RUH2_PETMA
PHTB1_N domain-containing protein.
   
 0.968
S4RTP4_PETMA
Leucine zipper transcription factor-like 1.
   
 0.943
S4R5R9_PETMA
PHTB1_C domain-containing protein.
   
 0.934
TTC8
Tetratricopeptide repeat domain 8.
    
 0.921
IFT122
Intraflagellar transport 122.
     
 0.722
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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