Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
CLDN18Claudin 18. (199 aa)    
Predicted Functional Partners:
S4RUF2_PETMA
Cholinergic receptor, nicotinic, alpha 2a (neuronal).
      
 0.846
S4RPE2_PETMA
Tetratricopeptide repeat domain 14.
      
 0.800
S4RV17_PETMA
Uncharacterized protein.
      
 0.788
S4R8L9_PETMA
Integrin, alpha 9; Belongs to the integrin alpha chain family.
   
  
 0.682
S4RKK5_PETMA
Integrin, alpha 9; Belongs to the integrin alpha chain family.
   
  
 0.682
S4RYI2_PETMA
Serine/threonine-protein kinase PLK.
      
 0.673
S4RF13_PETMA
Small integral membrane protein 29.
      
 0.670
ENPP3
Ectonucleotide pyrophosphatase/phosphodiesterase 3.
      
 0.668
S4RKX1_PETMA
Uncharacterized protein.
      
 0.668
S4R5D7_PETMA
Uncharacterized protein.
      
 0.646
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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