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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8F4_PETMAReversion-inducing-cysteine-rich protein with kazal motifs. (896 aa)    
Predicted Functional Partners:
S4R4Q8_PETMA
TGFb_propeptide domain-containing protein.
    
 0.516
S4R844_PETMA
Left-right determination factor.
    
 0.516
S4R8T9_PETMA
Bone morphogenetic protein 2.
    
 0.516
TGFB2
Transforming growth factor, beta 2.
    
 0.516
S4RBK6_PETMA
Inhibin subunit beta Ab.
    
 0.516
GDF7
Growth differentiation factor 7.
    
 0.516
GDF11
Growth differentiation factor 11.
    
 0.516
S4RM04_PETMA
Growth differentiation factor 3.
    
 0.516
S4RMA2_PETMA
TGF_BETA_2 domain-containing protein.
    
 0.516
S4RMB5_PETMA
Growth differentiation factor 10b.
    
 0.516
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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