Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R8G3_PETMAUncharacterized protein. (368 aa)    
Predicted Functional Partners:
S4RT99_PETMA
Casein kinase 1, epsilon; Belongs to the protein kinase superfamily.
    
   0.847
S4RZW5_PETMA
Uncharacterized protein.
      
 0.786
S4RN10_PETMA
Neutral sphingomyelinase (N-SMase) activation associated factor.
      
 0.601
S4RLN6_PETMA
Transmembrane protein 106Bb.
      
 0.591
S4RHJ9_PETMA
NSFL1 (p97) cofactor (p47).
      
 0.581
S4R901_PETMA
Casein kinase 1, alpha 1; Belongs to the protein kinase superfamily.
    
   0.569
S4RQ68_PETMA
Uncharacterized protein.
      
 0.563
S4RRV4_PETMA
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase.
      
 0.561
S4RME9_PETMA
Ras association domain family member 4a.
      
 0.555
S4RUJ9_PETMA
Stork_head domain-containing protein.
    
   0.503
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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