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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8G4_PETMASi:ch211-81a5.5. (504 aa)    
Predicted Functional Partners:
S4RHF3_PETMA
Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
   
 
  0.753
RANBP2
RAN binding protein 2.
   
 
  0.753
S4RCG0_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.739
S4RGC5_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.739
S4RJ74_PETMA
Uncharacterized protein.
   
 
 0.678
S4RWZ2_PETMA
Ankyrin repeat, family A (RFXANK-like), 2.
    
 0.652
S4RT75_PETMA
TSNAXIP1_N domain-containing protein.
   
    0.645
PIDD1
P53-induced death domain protein 1.
    
 0.584
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.581
S4R791_PETMA
Nuclear transcription factor Y, alpha.
     
 0.570
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.