Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8H5_PETMAG_PROTEIN_RECEP_F1_2 domain-containing protein. (291 aa)    
Predicted Functional Partners:
GNB3-2
WD_REPEATS_REGION domain-containing protein.
    
  0.676
S4RWD0_PETMA
WD_REPEATS_REGION domain-containing protein.
    
  0.676
S4RYE5_PETMA
Limb and CNS expressed 1.
      
 0.629
RAD21
RAD21 cohesin complex component.
      
 0.614
NRP2
Neuropilin 2.
      
 0.597
S4RU12_PETMA
Uncharacterized protein.
      
 0.597
S4RB30_PETMA
G_PROTEIN_RECEP_F1_2 domain-containing protein.
  
  
 0.592
S4R4L0_PETMA
Alkaline ceramidase; Hydrolyzes the sphingolipid ceramide into sphingosine and free fatty acid.
      
 0.586
THBS2
Thrombospondin 2b.
    
 
 0.554
S4RTI8_PETMA
Thrombospondin 1a.
    
 
 0.554
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.