Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R8H9_PETMAAnnexin. (316 aa)    
Predicted Functional Partners:
S4RMK2_PETMA
Uncharacterized protein.
   
 
 0.601
S4RVX9_PETMA
WD repeat domain 90.
   
 
 0.601
S4RFB3_PETMA
Sorcin.
   
 
 0.575
S4RFZ8_PETMA
Syntaxin binding protein 1a; Belongs to the STXBP/unc-18/SEC1 family.
    
 0.565
S4R4J4_PETMA
Uncharacterized protein.
    
 0.554
S4REX2_PETMA
Annexin.
   
 0.531
S4R6L9_PETMA
ELL domain-containing protein.
    
 0.491
S4R9X2_PETMA
Uncharacterized protein.
    
 0.491
S4RY75_PETMA
Peptidase S1 domain-containing protein; Belongs to the peptidase S1 family.
    
 0.490
PACRGL
Parkin coregulated like.
    
   0.489
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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