Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8I4_PETMAProline-rich coiled-coil 1. (466 aa)    
Predicted Functional Partners:
SEC24C
SEC24 homolog C, COPII coat complex component.
   
 
 0.870
S4R7Y9_PETMA
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.752
S4RVA5_PETMA
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 
 0.752
S4R8M6_PETMA
Platelet-activating factor acetylhydrolase 1b, catalytic subunit 2.
    
   0.566
S4R4I6_PETMA
Uncharacterized protein.
   
   0.516
S4RWS8_PETMA
Uncharacterized protein.
   
   0.516
S4RWH6_PETMA
HORMA domain-containing protein.
      
 0.489
S4RE13_PETMA
Store-operated calcium entry-associated regulatory factor.
   
  
 0.447
S4RBH2_PETMA
CWF19 like cell cycle control factor 1.
      
 0.422
S4RDF7_PETMA
Leucine zipper and CTNNBIP1 domain containing.
      
 0.422
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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