STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8I5_PETMATransient receptor potential cation channel, subfamily M, member 2. (1109 aa)    
Predicted Functional Partners:
S4R890_PETMA
ANK_REP_REGION domain-containing protein.
     
 0.904
S4RR70_PETMA
ANK_REP_REGION domain-containing protein.
     
 0.904
S4RUJ4_PETMA
Ion_trans domain-containing protein.
     
 0.904
S4RVD7_PETMA
Transient receptor potential cation channel, subfamily V, member 6; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.904
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
     
 0.880
NUDT2
Nudix (nucleoside diphosphate linked moiety X)-type motif 2.
    
 0.879
NUDT3
Nudix (nucleoside diphosphate linked moiety X)-type motif 3a.
    
 0.879
S4R6U9_PETMA
Nudix (nucleoside diphosphate linked moiety X)-type motif 8.
    
 0.855
NUDT7
Nudix hydrolase 7.
    
 0.855
S4RR93_PETMA
Si:dkey-6n6.2.
    
 0.853
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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