Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
SEMA6ASemaphorin 6A; Belongs to the semaphorin family. (471 aa)    
Predicted Functional Partners:
S4R9P8_PETMA
Uncharacterized protein.
    
 0.782
S4RBM0_PETMA
Ig-like domain-containing protein.
 
      0.637
S4R7A1_PETMA
PSI domain-containing protein.
    
 0.582
S4RGT4_PETMA
Uncharacterized protein.
    
 0.582
S4RNR0_PETMA
Plexin_cytopl domain-containing protein.
    
 0.582
S4RJF2_PETMA
Sema domain-containing protein.
   
 0.581
S4RWV5_PETMA
Protein kinase domain-containing protein.
   
 0.581
S4R6Y2_PETMA
Plexin_cytopl domain-containing protein.
    
 0.549
S4R799_PETMA
Plexin_cytopl domain-containing protein.
    
 0.549
S4RR58_PETMA
Plexin_cytopl domain-containing protein.
    
 0.549
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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