Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R8J8_PETMAUncharacterized protein. (519 aa)    
Predicted Functional Partners:
S4S1L4_PETMA
Potassium inwardly-rectifying channel, subfamily J, member 11, like.
   
 0.976
S4RIY2_PETMA
Uncharacterized protein.
 
   
 
0.912
ABCC8
ATP-binding cassette, sub-family C (CFTR/MRP), member 8b.
  
  
 
0.901
S4RUM9_PETMA
ABC transmembrane type-1 domain-containing protein.
 
      0.900
S4RC39_PETMA
Uncharacterized protein.
 
      0.898
S4RFP9_PETMA
Uncharacterized protein.
 
      0.845
S4R5W4_PETMA
Golgi-associated PDZ and coiled-coil motif containing.
    
 0.597
S4RC47_PETMA
Uncharacterized protein.
    
   0.591
S4R9C4_PETMA
Uncharacterized protein.
   
 0.582
S4RSM9_PETMA
Derlin; Functional component of endoplasmic reticulum-associated degradation (ERAD) for misfolded lumenal proteins. May act by forming a channel that allows the retrotranslocation of misfolded proteins into the cytosol where they are ubiquitinated and degraded by the proteasome; Belongs to the derlin family.
    
  0.580
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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