Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8K3_PETMAUncharacterized protein. (86 aa)    
Predicted Functional Partners:
S4R759_PETMA
GATA zinc finger domain containing 2B.
      
 0.807
S4RAB0_PETMA
Serine/threonine-protein phosphatase.
      
 0.687
S4RB71_PETMA
G protein-coupled receptor 22b.
      
 0.654
S4R872_PETMA
Arm_2 domain-containing protein.
      
 0.565
S4R5K5_PETMA
SUN domain-containing protein.
      
 0.463
S4RGU9_PETMA
SUN domain-containing protein.
      
 0.463
GPR162
G protein-coupled receptor 153.
      
 0.462
S4RDF5_PETMA
Uncharacterized protein.
  
     0.433
S4RX99_PETMA
Tetraspanin.
  
     0.425
S4RH14_PETMA
Tetraspanin.
  
     0.417
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.