STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8K4_PETMAUncharacterized protein. (259 aa)    
Predicted Functional Partners:
S4R637_PETMA
Protein kinase domain-containing protein.
   
 0.909
S4RHM4_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.909
S4RM58_PETMA
Protein kinase domain-containing protein.
 
      0.900
S4RK02_PETMA
Uncharacterized protein.
    
 0.897
S4RLW1_PETMA
Ig-like domain-containing protein.
    
 0.897
S4RK65_PETMA
B-Raf proto-oncogene, serine/threonine kinase.
 
  
 0.896
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 0.864
S4RXH7_PETMA
A-Raf proto-oncogene, serine/threonine kinase.
 
  
 0.860
S4R6V1_PETMA
PB1 domain-containing protein.
   
 0.851
S4RCG0_PETMA
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
  0.825
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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