Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R8M4_PETMAHairy-related 9. (154 aa)    
Predicted Functional Partners:
S4RMQ1_PETMA
FA complementation group L.
    
  0.981
S4R9I8_PETMA
FA complementation group I.
     
  0.900
S4RGX3_PETMA
BHLH domain-containing protein.
     
 
0.900
S4RPK0_PETMA
Uncharacterized protein.
     
  0.900
S4RB78_PETMA
Uncharacterized protein.
    
 0.884
S4RBD7_PETMA
Uncharacterized protein.
    
 0.884
S4RBI9_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.884
S4RJF9_PETMA
Uncharacterized protein.
    
 0.849
S4RV86_PETMA
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
    
   0.848
S4RDJ6_PETMA
Uncharacterized protein.
   
 
 0.816
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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