STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8M6_PETMAPlatelet-activating factor acetylhydrolase 1b, catalytic subunit 2. (234 aa)    
Predicted Functional Partners:
S4RTD7_PETMA
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.990
PLA2G4A
Phospholipase A2, group IVAb (cytosolic, calcium-dependent).
     
 0.838
S4RDS9_PETMA
Phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma).
     
 0.830
S4RT76_PETMA
Phospholipase A(2).
     
 0.827
S4R9A1_PETMA
Uncharacterized protein.
     
 0.820
S4RJ95_PETMA
Phospholipase A2, group IVF, tandem duplicate 2.
     
 0.816
S4RR05_PETMA
Selenoprotein I; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.802
S4RML0_PETMA
Phospholipase A(2).
     
 0.756
S4RSK0_PETMA
Phospholipase A(2).
     
 0.756
S4R495_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.726
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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