STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8N1_PETMAUncharacterized protein. (112 aa)    
Predicted Functional Partners:
S4RT25_PETMA
Epoxide hydrolase 2, cytoplasmic.
  
 
 0.923
S4RCN5_PETMA
Uroporphyrinogen decarboxylase.
    
 0.901
S4RTS3_PETMA
Riboflavin kinase.
    
 0.896
S4RLG2_PETMA
Rhodanese domain-containing protein.
    
 0.854
S4RS31_PETMA
Si:ch211-161h7.8.
    
 0.854
S4R856_PETMA
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
 0.847
S4RX49_PETMA
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol- phosphate-mannose required for a number of critical mannosyl transfer reactions.
    
  0.828
S4RCP3_PETMA
Nudix (nucleoside diphosphate linked moiety X)-type motif 15; Belongs to the Nudix hydrolase family.
    
  0.827
S4RZI4_PETMA
Pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha.
  
 
  0.818
NQO2
N-ribosyldihydronicotinamide:quinone reductase 2.
  
 
 0.810
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.