STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8N3_PETMAUncharacterized protein. (280 aa)    
Predicted Functional Partners:
S4R5I6_PETMA
Uncharacterized protein.
   
 0.782
S4R5M4_PETMA
Zinc finger protein 1156.
   
 0.782
S4RFG3_PETMA
PR domain containing 4.
   
 0.782
S4RKN7_PETMA
PR domain containing 5.
   
 0.782
S4S051_PETMA
SET domain-containing protein.
   
 0.782
S4RFP0_PETMA
SET domain-containing protein.
    
 0.760
S4REN7_PETMA
Proteasome 26S subunit, non-ATPase 3.
    
 0.751
S4R9E4_PETMA
Embryonic ectoderm development.
    
 0.730
S4RZ66_PETMA
SUZ12 polycomb repressive complex 2 subunit a.
    
 0.718
S4RLQ8_PETMA
ANK_REP_REGION domain-containing protein.
    
 0.715
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.