Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8P2_PETMAUncharacterized protein. (188 aa)    
Predicted Functional Partners:
S4RI45_PETMA
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
 
     0.935
S4RUG7_PETMA
Phospholipase A2, group XV.
    
 
 0.711
S4RMV4_PETMA
Lipin_mid domain-containing protein.
    
 0.657
S4RTM3_PETMA
tRNA-binding domain-containing protein.
      
 0.640
S4RB11_PETMA
Phospholipid phosphatase 1a.
    
 0.639
S4REX0_PETMA
Uncharacterized protein.
    
 0.639
S4RG19_PETMA
Uncharacterized protein.
    
 0.639
S4RKE9_PETMA
acidPPc domain-containing protein.
    
 0.639
S4RPT3_PETMA
Coiled-coil domain containing 115.
    
 0.639
S4RSY3_PETMA
Phospholipid phosphatase 5.
    
 0.639
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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