Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
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[Homology]
Score
S4R8P5_PETMAMultiple EGF-like-domains 8. (1695 aa)    
Predicted Functional Partners:
S4RE68_PETMA
Smoothened, frizzled class receptor; Belongs to the G-protein coupled receptor Fz/Smo family.
     
 0.902
S4R495_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.592
BCL3
BCL3 transcription coactivator.
    
 
 0.588
S4RA03_PETMA
Ankyrin repeat domain 46b.
    
   0.587
S4RTD7_PETMA
Platelet-activating factor acetylhydrolase 1b, regulatory subunit 1b.
    
 0.576
S4RCM5_PETMA
G_PROTEIN_RECEP_F3_4 domain-containing protein.
    
 
 0.530
S4RVM3_PETMA
HEAT repeat containing 5B.
    
 
 0.528
RNF157
Ring finger protein 157.
   
 
 0.518
S4RM55_PETMA
Thyroid hormone receptor beta.
   
  
 0.487
S4S056_PETMA
BC1 (ubiquinol-cytochrome c reductase) synthesis-like; Belongs to the AAA ATPase family.
      
 0.461
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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