Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R8P6_PETMAProgrammed cell death 10a. (181 aa)    
Predicted Functional Partners:
S4R768_PETMA
CCM2_C domain-containing protein.
    
 0.998
S4RVA6_PETMA
Serine/threonine kinase 25a.
   
 
 0.977
S4R898_PETMA
MOB family member 4, phocein.
   
 
 0.968
S4RNS4_PETMA
DUF3402 domain-containing protein.
    
 
 0.961
S4RVN2_PETMA
Striatin, calmodulin binding protein 3.
    
 
 0.951
S4RS94_PETMA
FGFR1 oncogene partner 2.
   
 
 0.946
PPP2R1A
Protein phosphatase 2, regulatory subunit A, beta b.
    
 
 0.928
S4RQG6_PETMA
KRIT1 ankyrin repeat containing.
    
 
 0.915
S4RJ37_PETMA
Serine/threonine-protein phosphatase.
    
 
 0.914
PXN-2
Paxillin.
    
 
 0.831
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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