Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8P9_PETMAF-box domain-containing protein. (764 aa)    
Predicted Functional Partners:
S4RHX4_PETMA
Cullin 1b; Belongs to the cullin family.
    
 0.847
CETN1
Centrin, EF-hand protein, 2.
    
   0.822
S4RR98_PETMA
Ring-box 1, E3 ubiquitin protein ligase.
    
 0.777
S4RTR0_PETMA
Uncharacterized protein.
    
 
 0.730
FBXO16
F-box protein 16.
   
 0.700
S4RM25_PETMA
Ciliogenesis associated TTC17 interacting protein.
    
 
 0.692
S4RPJ0_PETMA
Uncharacterized protein.
    
 
 0.684
S4RA28_PETMA
Family with sequence similarity 185 member A.
      
 0.671
S4RSG3_PETMA
Leucine rich repeat containing 6.
    
 
 0.661
S4RT29_PETMA
DC_STAMP domain-containing protein.
      
 0.639
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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