Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
S4R8Q3_PETMAProtein kinase domain-containing protein. (665 aa)    
Predicted Functional Partners:
S4RWF4_PETMA
Uncharacterized protein.
    
 0.687
S4RVS6_PETMA
TNF receptor-associated factor 7.
   
 0.667
S4REH8_PETMA
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.628
S4RW01_PETMA
Glycerol-3-phosphate dehydrogenase [NAD(+)].
    
  0.628
S4RTC7_PETMA
Uncharacterized protein.
    
 0.594
S4RBT6_PETMA
Tumor necrosis factor, alpha-induced protein 6.
    
 0.577
S4RXS5_PETMA
Pellino E3 ubiquitin protein ligase family member 2.
    
 0.567
S4RZQ4_PETMA
Uncharacterized protein.
    
 0.567
S4RSL0_PETMA
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
    
  0.541
S4RCK5_PETMA
Uncharacterized protein.
    
 0.516
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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