STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8R2_PETMATubulin tyrosine ligase-like family, member 12. (602 aa)    
Predicted Functional Partners:
S4R4D6_PETMA
Aldehyde dehydrogenase 6 family, member A1.
 
   
  0.746
S4S1N9_PETMA
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
    
   0.663
S4RUG6_PETMA
Uncharacterized protein.
      
0.487
S4RG44_PETMA
Uncharacterized protein.
      
 0.483
S4RKL5_PETMA
DnaJ heat shock protein family (Hsp40) member B1b.
    
 
 0.483
S4RY67_PETMA
Uncharacterized protein.
      
 0.474
S4R5F2_PETMA
Aldehyde dehydrogenase 8 family, member A1; Belongs to the aldehyde dehydrogenase family.
 
   
  0.441
S4RHA8_PETMA
Aldedh domain-containing protein; Belongs to the aldehyde dehydrogenase family.
 
   
  0.441
S4R525_PETMA
ATP/GTP binding protein 1.
      
 0.422
S4RF41_PETMA
DnaJ heat shock protein family (Hsp40) member B14.
    
 
 0.410
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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