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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8R4_PETMAGalactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase; Belongs to the glycosyltransferase 43 family. (326 aa)    
Predicted Functional Partners:
S4RBJ9_PETMA
Carbohydrate sulfotransferase.
     
 0.722
S4RYW2_PETMA
Hexosyltransferase.
     
 0.604
S4S1N7_PETMA
Uncharacterized protein.
     
 0.604
S4RB43_PETMA
Beta-1,4 N-acetylgalactosaminyltransferase.
   
 
 0.556
S4RF87_PETMA
Glyco_trans_2-like domain-containing protein.
   
 
 0.556
S4RUY9_PETMA
Glyco_trans_2-like domain-containing protein.
   
 
 0.556
S4RG24_PETMA
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 3.
 
 
 
 0.520
B4GALT1
Beta-1,4-galactosyltransferase 1.
 
 
 
 0.520
B4GALT1-2
Beta-1,4-galactosyltransferase 1.
 
 
 
 0.520
S4RP30_PETMA
UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2.
 
 
 
 0.520
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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