Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8R5_PETMAPoly [ADP-ribose] polymerase. (379 aa)    
Predicted Functional Partners:
S4RC47_PETMA
Uncharacterized protein.
    
   0.821
S4RVB9_PETMA
Ring finger protein 166.
    
   0.773
S4RH50_PETMA
Uncharacterized protein.
      
 0.665
st3gal2
ST3 beta-galactoside alpha-2,3-sialyltransferase 2; Belongs to the glycosyltransferase 29 family.
      
 0.653
S4R7L0_PETMA
C3H1-type domain-containing protein.
    
   0.569
S4RLY9_PETMA
Uncharacterized protein.
   
 
 0.567
S4RXA3_PETMA
Uncharacterized protein.
    
 
 0.532
S4RN42_PETMA
Uncharacterized protein.
      
 0.517
S4R9B4_PETMA
Uncharacterized protein.
    
 
 0.514
S4RAU2_PETMA
Uncharacterized protein.
   
 
 0.493
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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