STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8S3_PETMASelenophosphate synthetase 1. (344 aa)    
Predicted Functional Partners:
SCLY
Selenocysteine lyase.
  
 0.995
S4RAG1_PETMA
Uncharacterized protein.
     
 0.991
NFS1
Aminotran_5 domain-containing protein.
  
 0.966
S4RKK1_PETMA
Thioredoxin reductase 3.
  
 
 0.952
S4RSK8_PETMA
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
 
    
 0.883
S4RQK1_PETMA
Eukaryotic elongation factor, selenocysteine-tRNA-specific.
     
 0.831
S4RML1_PETMA
Selenoprotein N.
      
 0.785
S4RB19_PETMA
Seryl-tRNA synthetase 2, mitochondrial.
      
 0.752
S4RJL4_PETMA
Aminotran_5 domain-containing protein.
   
 0.731
S4RC31_PETMA
SECIS binding protein 2.
     
 0.716
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.