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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8T5_PETMAGST C-terminal domain-containing protein. (70 aa)    
Predicted Functional Partners:
S4R4M6_PETMA
ProRS-C_1 domain-containing protein.
   
 0.985
S4R4M7_PETMA
Uncharacterized protein.
   
 0.985
S4RT48_PETMA
Eukaryotic translation elongation factor 1 delta a (guanine nucleotide exchange protein); Belongs to the EF-1-beta/EF-1-delta family.
   
 0.923
S4RSL0_PETMA
Eukaryotic translation elongation factor 1 gamma; Belongs to the GST superfamily.
   
 0.857
S4S1N9_PETMA
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.846
S4RHE8_PETMA
Methionyl-tRNA synthetase 2, mitochondrial; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
 0.803
S4RTM3_PETMA
tRNA-binding domain-containing protein.
   
 0.778
S4RHA9_PETMA
Uncharacterized protein; Belongs to the GST superfamily.
   
 0.763
S4RET9_PETMA
Uncharacterized protein.
   
 0.754
PIDD1
P53-induced death domain protein 1.
    
 0.749
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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