Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8T6_PETMABiogenesis of lysosomal organelles complex-1, subunit 1. (79 aa)    
Predicted Functional Partners:
S4RFU7_PETMA
Biogenesis of lysosomal organelles complex-1, subunit 3.
    
 0.999
S4RBQ1_PETMA
Biogenesis of lysosomal organelles complex-1, subunit 4, cappuccino.
    
 0.997
S4RSJ5_PETMA
BLOC-1 related complex subunit 8.
   
 
 0.989
S4RYJ7_PETMA
BLOC-1 related complex subunit 5.
    
 
 0.961
S4REA5_PETMA
Uncharacterized protein.
    
 
 0.958
S4RC03_PETMA
Thioredoxin domain containing 5.
     
 0.948
S4RWF4_PETMA
Uncharacterized protein.
    
  0.933
S4REW9_PETMA
Deoxyribonuclease II, lysosomal.
   
 
  0.809
S4R6G9_PETMA
Transforming growth factor beta regulator 4.
   
 
  0.794
S4RF84_PETMA
N-acetylglucosamine-6-sulfatase; Belongs to the sulfatase family.
     
  0.785
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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