STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8U1_PETMAUncharacterized protein. (322 aa)    
Predicted Functional Partners:
S4RPV3_PETMA
Uncharacterized protein.
 
     0.930
S4RN22_PETMA
Mitogen-activated protein kinase kinase 4b; Belongs to the protein kinase superfamily.
    
 0.740
S4RHT6_PETMA
LIM domain containing preferred translocation partner in lipoma.
    
 0.689
S4RYR7_PETMA
LIM zinc-binding domain-containing protein.
    
 0.689
ITGB1
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
S4R7J7_PETMA
Uncharacterized protein.
    
 0.623
ITGB1-2
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
S4RJS3_PETMA
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
S4RS57_PETMA
Integrin beta.
    
 0.623
S4RSM3_PETMA
Integrin beta; Belongs to the integrin beta chain family.
    
 0.623
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.