Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8U6_PETMAGBD/FH3 domain-containing protein. (430 aa)    
Predicted Functional Partners:
S4RAJ0_PETMA
Uncharacterized protein.
 
     0.921
S4RZA3_PETMA
FH2 domain-containing protein.
 
     0.917
S4RTA0_PETMA
FH2 domain-containing protein.
 
      0.900
S4RP15_PETMA
UDENN FLCN/SMCR8-type domain-containing protein.
    
 
 0.565
S4RBA1_PETMA
Uncharacterized protein.
    
 0.556
S4RDV8_PETMA
Uncharacterized protein.
    
 0.556
S4RI92_PETMA
Uncharacterized protein.
    
 0.556
S4RPS4_PETMA
Uncharacterized protein.
    
 0.556
S4RH85_PETMA
Uncharacterized protein.
    
 0.528
ACTG2
Actin gamma 2, smooth muscle.
    
 0.528
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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