Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
S4R8V0_PETMASi:ch211-120k19.1; Belongs to the peroxisomal membrane protein PXMP2/4 family. (192 aa)    
Predicted Functional Partners:
S4REV8_PETMA
Mitochondrial inner membrane protein MPV17; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
0.940
AFMID
Kynurenine formamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation. Kynurenine may be further oxidized to nicotinic acid, NAD(H) and NADP(H). Required for elimination of toxic metabolites.
   
  
 0.697
PEX3
Peroxisomal biogenesis factor 3.
   
 
 0.648
ENSPMAP00000001833
annotation not available
   
 
 0.648
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
     
 0.647
S4R9Y3_PETMA
Peroxisomal biogenesis factor 11 beta.
   
 
 0.636
PXMP4
Peroxisomal membrane protein 4; Belongs to the peroxisomal membrane protein PXMP2/4 family.
     
 0.632
S4RZB0_PETMA
WD repeat domain 66.
    
 
 0.622
S4RCQ9_PETMA
Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.
     
 0.620
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
   
 0.614
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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