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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8V1_PETMAUncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (285 aa)    
Predicted Functional Partners:
S4RPC9_PETMA
Hydroxyacyl-CoA dehydrogenase.
 
 
 0.969
S4RDH8_PETMA
Enoyl-CoA delta isomerase 2.
  
0.896
S4RRA2_PETMA
Enoyl-CoA delta isomerase 2.
  
0.896
S4RGH5_PETMA
Uncharacterized protein.
 
 
 0.867
S4RMV6_PETMA
Peroxisomal biogenesis factor 5.
    
 0.849
S4R7R6_PETMA
Uncharacterized protein.
 
 
 0.814
S4RCC2_PETMA
Chromo domain-containing protein.
  
0.808
S4RLH8_PETMA
SCP2 domain-containing protein.
   
 0.775
S4RVG8_PETMA
Enoyl-CoA delta isomerase 1.
   
 0.738
S4R7V1_PETMA
Enoyl CoA hydratase, short chain, 1, mitochondrial; Belongs to the enoyl-CoA hydratase/isomerase family.
  
0.725
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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