Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8V6_PETMAZP domain-containing protein. (180 aa)    
Predicted Functional Partners:
S4RQU5_PETMA
G_PROTEIN_RECEP_F2_4 domain-containing protein.
    
   0.765
ADGRL2
Adhesion G protein-coupled receptor L2; Belongs to the G-protein coupled receptor 2 family.
    
   0.765
Q9PRN2_PETMA
Op_neuropeptide domain-containing protein.
    
  0.701
GNB3
WD_REPEATS_REGION domain-containing protein.
    
 0.520
GNB3-2
WD_REPEATS_REGION domain-containing protein.
    
 0.520
S4RV11_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.520
S4RWD0_PETMA
WD_REPEATS_REGION domain-containing protein.
    
 0.520
GNB5
Guanine nucleotide binding protein (G protein), beta 5b.
    
 0.520
S4R4E0_PETMA
Uncharacterized protein.
    
 0.516
S4RQ31_PETMA
Uncharacterized protein.
    
 0.516
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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