Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R8W0_PETMANon-SMC condensin II complex, subunit D3. (1515 aa)    
Predicted Functional Partners:
S4R927_PETMA
Structural maintenance of chromosomes protein.
   
 0.999
S4REK7_PETMA
Non-SMC condensin II complex, subunit G2.
   
 0.999
S4REV6_PETMA
Non-SMC condensin II complex, subunit H2.
   
 0.999
S4RTN0_PETMA
Structural maintenance of chromosomes protein.
   
 0.999
S4RS32_PETMA
Condensin complex subunit 2; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes.
   
 0.950
S4RYI2_PETMA
Serine/threonine-protein kinase PLK.
   
 0.916
S4RV39_PETMA
Uncharacterized protein.
      
 0.756
S4RMT1_PETMA
RAB21, member RAS oncogene family.
    
 
 0.720
S4RN58_PETMA
Retinoblastoma-like 1 (p107).
   
 0.715
S4RZ01_PETMA
Uncharacterized protein.
   
 0.694
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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