Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
IFT122Intraflagellar transport 122. (1102 aa)    
Predicted Functional Partners:
S4RCS6_PETMA
WD_REPEATS_REGION domain-containing protein.
   
 0.999
S4RS46_PETMA
Tetratricopeptide repeat domain 21B.
   
 0.999
S4RT27_PETMA
WD_REPEATS_REGION domain-containing protein.
  
 0.999
S4RUG2_PETMA
Uncharacterized protein.
    
 0.999
S4RZK2_PETMA
WD_REPEATS_REGION domain-containing protein.
   
 0.999
S4RAS9_PETMA
Intraflagellar transport 52 homolog (Chlamydomonas).
   
 0.975
S4R8I3_PETMA
Clusterin associated protein 1.
    
 0.969
IFT172
Uncharacterized protein.
   
 0.965
S4RIE6_PETMA
MIP-T3 domain-containing protein.
    
 0.958
S4RKI6_PETMA
Intraflagellar transport 88 homolog.
   
 0.956
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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