Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8W2_PETMAUncharacterized protein. (651 aa)    
Predicted Functional Partners:
PPL
Periplakin.
    
 0.675
S4REM4_PETMA
Sequestosome 1.
    
 0.666
S4RQA2_PETMA
Ion_trans domain-containing protein.
    
  0.658
DDX41
DEAD-box helicase 41.
    
 0.634
S4RP44_PETMA
Ubiquitin-like domain-containing protein.
    
  0.630
S4RSA6_PETMA
Uncharacterized protein.
   
 0.579
UBE2N
Ubiquitin conjugating enzyme E2 N.
    
 0.572
S4RTI7_PETMA
UBIQUITIN_CONJUGAT_2 domain-containing protein.
    
 0.569
S4R9U7_PETMA
Uncharacterized protein.
     
 0.565
S4RM11_PETMA
Ubiquitin specific peptidase 14 (tRNA-guanine transglycosylase); Belongs to the peptidase C19 family.
    
 
 0.503
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
Server load: low (24%) [HD]