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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8W3_PETMACalcium binding protein 39-like. (337 aa)    
Predicted Functional Partners:
S4RSP4_PETMA
Serine/threonine kinase 11.
    
 0.994
S4RVA6_PETMA
Serine/threonine kinase 25a.
    
 
 0.976
S4RRN9_PETMA
Protein kinase domain-containing protein.
   
 0.940
S4R5F7_PETMA
OSR1_C domain-containing protein.
    
 0.925
S4RN19_PETMA
Testis-specific serine kinase 6; Belongs to the protein kinase superfamily.
    
 0.846
S4RYB5_PETMA
Protein kinase domain-containing protein.
    
 0.820
S4RY39_PETMA
Leucine rich repeat and sterile alpha motif containing 1.
    
 
 0.812
S4RDT7_PETMA
Tribbles pseudokinase 3.
    
 0.796
S4RH43_PETMA
Tribbles pseudokinase 3.
    
 0.796
S4RVH3_PETMA
Tribbles pseudokinase 3.
    
 0.796
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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