Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R8W3_PETMACalcium binding protein 39-like. (337 aa)    
Predicted Functional Partners:
S4RSP4_PETMA
Serine/threonine kinase 11.
    
 0.996
S4RVA6_PETMA
Serine/threonine kinase 25a.
   
 
 0.956
S4RY39_PETMA
Leucine rich repeat and sterile alpha motif containing 1.
    
 
 0.948
S4R6C9_PETMA
Non-specific serine/threonine protein kinase.
    
 
 0.868
S4RRN9_PETMA
Protein kinase domain-containing protein.
    
 0.863
S4R5F7_PETMA
OSR1_C domain-containing protein.
    
 0.775
S4R679_PETMA
MOR2-PAG1_C domain-containing protein.
    
 
 0.706
S4RJA7_PETMA
Furry homolog, like.
    
 
 0.706
S4RJB1_PETMA
MOB kinase activator 2.
    
 
 0.686
S4RYB5_PETMA
Protein kinase domain-containing protein.
    
 0.683
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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