STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8W4_PETMACoiled-coil domain containing 174. (464 aa)    
Predicted Functional Partners:
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
   
    0.761
ZNF830
U1-type domain-containing protein.
   
    0.723
S4RIP9_PETMA
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
    0.707
S4RED6_PETMA
Uncharacterized protein.
    
 
 0.605
S4RXE9_PETMA
Uncharacterized protein.
    
 
 0.605
S4RLS1_PETMA
DnaJ (Hsp40) homolog, subfamily C, member 27.
   
 0.595
S4REU6_PETMA
Uncharacterized protein.
   
 0.591
S4RF79_PETMA
Uncharacterized protein.
   
 0.591
S4RQ50_PETMA
Rac family small GTPase 2.
   
 0.591
RHOU
Ras homolog family member U.
   
 0.591
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.