Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
S4R8W4_PETMACoiled-coil domain containing 174. (464 aa)    
Predicted Functional Partners:
S4RED6_PETMA
Uncharacterized protein.
    
 
 0.873
S4RXE9_PETMA
Uncharacterized protein.
    
 
 0.873
S4RHI6_PETMA
4F5 domain-containing protein.
      
 0.862
S4RLU2_PETMA
Dihydrolipoyl dehydrogenase.
   
    0.770
S4RIP9_PETMA
Heat shock protein 5; Belongs to the heat shock protein 70 family.
   
    0.710
S4RZJ8_PETMA
Mtr4 exosome RNA helicase.
    
 
 0.697
S4RAV6_PETMA
MI domain-containing protein.
      
 0.667
S4RB71_PETMA
G protein-coupled receptor 22b.
      
 0.638
S4RRJ7_PETMA
CULT domain-containing protein.
      
 0.628
S4RLQ4_PETMA
Tuftelin-interacting protein 11; Involved in pre-mRNA splicing, specifically in spliceosome disassembly during late-stage splicing events. Belongs to the TFP11/STIP family.
   
 
 0.616
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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