Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8W7_PETMAUncharacterized protein. (262 aa)    
Predicted Functional Partners:
S4RHX2_PETMA
Uncharacterized protein.
    
   0.618
S4RE73_PETMA
Endostatin domain-containing protein.
  
 
  0.603
S4RX02_PETMA
VWFA domain-containing protein.
  
 
  0.554
S4R863_PETMA
SRCR domain-containing protein.
  
 
  0.546
S4RJ23_PETMA
C1q domain-containing protein.
  
     0.535
S4RYE9_PETMA
Uncharacterized protein.
  
     0.535
S4RPX1_PETMA
Collagen, type VI, alpha 1.
  
 
0.534
ADIPOQ-3
Adiponectin, C1Q and collagen domain containing.
  
     0.531
S4RD27_PETMA
C1q and TNF related 7.
  
     0.528
S4RW50_PETMA
C1q domain-containing protein.
  
     0.521
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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