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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
S4R8W9_PETMAAAA_12 domain-containing protein. (223 aa)    
Predicted Functional Partners:
S4RNJ7_PETMA
WD repeat and HMG-box DNA binding protein 1.
   
 
 0.972
DNA2
DNA replication helicase/nuclease 2.
 
     0.944
S4RRM4_PETMA
Exonuclease 1.
   
 0.922
S4RTX2_PETMA
Rep_fac-A_C domain-containing protein.
    
 0.914
S4RUQ4_PETMA
Rep_fac-A_C domain-containing protein.
    
 0.914
S4R5L5_PETMA
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.904
S4RJK6_PETMA
Helicase C-terminal domain-containing protein.
   
 0.892
S4RWU1_PETMA
Replication protein A2.
   
 0.884
S4RIL8_PETMA
ATP-dependent DNA helicase; Belongs to the helicase family. RecQ subfamily.
   
 0.863
S4RPZ6_PETMA
MRE11 homolog A, double strand break repair nuclease.
   
 0.862
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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