Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8X0_PETMAUncharacterized protein. (306 aa)    
Predicted Functional Partners:
S4RFK4_PETMA
Uncharacterized protein.
 
 
 0.946
S4RNJ5_PETMA
Chimerin 1.
 
 
 0.946
S4RVI7_PETMA
Growth factor receptor-bound protein 2a.
    
 0.916
S4S053_PETMA
DH domain-containing protein.
 
      0.900
S4RJV5_PETMA
Tyrosine-protein kinase.
    
 0.874
S4RK75_PETMA
Excision repair cross-complementation group 3.
    
   0.829
S4RVD8_PETMA
V-crk avian sarcoma virus CT10 oncogene homolog-like.
    
 
 0.728
S4R8D6_PETMA
PI3K-RBD domain-containing protein; Belongs to the PI3/PI4-kinase family.
    
 0.685
S4RB60_PETMA
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit.
    
 0.685
S4R6P1_PETMA
Cbl-PTB domain-containing protein.
    
 
 0.651
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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