Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
S4R8X3_PETMAUncharacterized protein; Belongs to the beta/gamma-crystallin family. (513 aa)    
Predicted Functional Partners:
S4R7K8_PETMA
Uncharacterized protein.
 
      0.900
S4RB75_PETMA
ADH_N domain-containing protein.
      
 0.618
S4RXB6_PETMA
Crystallin, lambda 1.
      
 0.614
S4R9N7_PETMA
Prenyl (decaprenyl) diphosphate synthase, subunit 2; Belongs to the FPP/GGPP synthase family.
      
 0.593
S4R503_PETMA
Uncharacterized protein.
      
 0.561
S4R5U3_PETMA
Uncharacterized protein.
  
     0.476
BRINP2
BMP/retinoic acid inducible neural specific 2.
  
     0.473
S4RFI7_PETMA
Neurexophilin 1.
  
     0.462
S4RBE4_PETMA
Cartilage intermediate layer protein 2.
  
     0.445
S4RBL7_PETMA
Neurexophilin 2b.
  
     0.443
Your Current Organism:
Petromyzon marinus
NCBI taxonomy Id: 7757
Other names: P. marinus, marine lamprey, sea lamprey, sea lampreys
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